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Interactive 3D CT Data Segmentation Based on Deep Learning
Trávníčková, Kateřina ; Hradiš, Michal (referee) ; Kodym, Oldřich (advisor)
This thesis deals with CT data segmentation using convolutional neural nets and describes the problem of training with limited training sets. User interaction is suggested as means of improving segmentation quality for the models trained on small training sets and the possibility of using transfer learning is also considered. All of the chosen methods help improve the segmentation quality in comparison with the baseline method, which is the use of automatic data specific segmentation model. The segmentation has improved by tens of percents in Dice score when trained with very small datasets. These methods can be used, for example, to simplify the creation of a new segmentation dataset.
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Medical Image Data Compression
Šebek, Jiří ; Bařina, David (referee) ; Kršek, Přemysl (advisor)
This thesis deals with several lossless methods of image compression. The main goal is to achieve the best compression ratio for set of medical images. This paper provides brief introduction into the data compression theory. It also contains design of image compression and description of designed compression modules implementation. Also the verifi cation of suitability of designed method for medical images compression is involved.
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Displaying 3D Graphics in Web Browser
Sychra, Tomáš ; Pečiva, Jan (referee) ; Španěl, Michal (advisor)
This thesis discusses possibilities of accelerated 3D scene displaying in a Web browser. In more detail, it deals with WebGL standard and its use in real applications. An application for visualization of volumetric medical data based on JavaScript, WebGL and Three.js library was designed and implemented. Image data are loaded from Google Drive cloud storage. An important part of the application is 3D visualization of the volumetric data based on volume rendering technique called Ray-casting.
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Patient data trasfer over GSM
Pavliš, Jaroslav ; Dlouhý, Jiří (referee) ; Švrček, Martin (advisor)
This diploma thesis is concerned with possibilities of patient data transfer from a pacemaker or implantable cardioverter-defibrillator to physician over GSM. Theoretical part describes options of data transfer in GSM networks, data appropriate for sending and a structure of message is proposed. A device, that is able to send medical data in a form of SMS messages is designed and constructed. The device uses a Freescale MC68HC908GP32 microcontroller, character display with a Hitachi HD44780 controller and a cell phone Sony CMD-J70. The program for microcontroller is written in assembler for HC08. For tabular view of received messages, an application software for PC was created.
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Displaying 3D Graphics in Web Browser
Sychra, Tomáš ; Kršek, Přemysl (referee) ; Španěl, Michal (advisor)
This bachelor's thesis deals with display of accelerated 3D graphics in a web browser environment. Existing technologies such as WebGL are presented and discussed. Further, in the second part of the thesis, an application for browsing medical volumetric data is designed and implemented. The application is built with the WebGL technology and Javascript graphics engine called O3D API.
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Interactive 3D CT Data Segmentation Based on Deep Learning
Trávníčková, Kateřina ; Hradiš, Michal (referee) ; Kodym, Oldřich (advisor)
This thesis deals with CT data segmentation using convolutional neural nets and describes the problem of training with limited training sets. User interaction is suggested as means of improving segmentation quality for the models trained on small training sets and the possibility of using transfer learning is also considered. All of the chosen methods help improve the segmentation quality in comparison with the baseline method, which is the use of automatic data specific segmentation model. The segmentation has improved by tens of percents in Dice score when trained with very small datasets. These methods can be used, for example, to simplify the creation of a new segmentation dataset.
|
|
|
Displaying 3D Graphics in Web Browser
Sychra, Tomáš ; Pečiva, Jan (referee) ; Španěl, Michal (advisor)
This thesis discusses possibilities of accelerated 3D scene displaying in a Web browser. In more detail, it deals with WebGL standard and its use in real applications. An application for visualization of volumetric medical data based on JavaScript, WebGL and Three.js library was designed and implemented. Image data are loaded from Google Drive cloud storage. An important part of the application is 3D visualization of the volumetric data based on volume rendering technique called Ray-casting.
|
|
|
Medical Image Data Compression
Šebek, Jiří ; Bařina, David (referee) ; Kršek, Přemysl (advisor)
This thesis deals with several lossless methods of image compression. The main goal is to achieve the best compression ratio for set of medical images. This paper provides brief introduction into the data compression theory. It also contains design of image compression and description of designed compression modules implementation. Also the verifi cation of suitability of designed method for medical images compression is involved.
|
|
|
Displaying 3D Graphics in Web Browser
Sychra, Tomáš ; Kršek, Přemysl (referee) ; Španěl, Michal (advisor)
This bachelor's thesis deals with display of accelerated 3D graphics in a web browser environment. Existing technologies such as WebGL are presented and discussed. Further, in the second part of the thesis, an application for browsing medical volumetric data is designed and implemented. The application is built with the WebGL technology and Javascript graphics engine called O3D API.
|
|
|
Patient data trasfer over GSM
Pavliš, Jaroslav ; Dlouhý, Jiří (referee) ; Švrček, Martin (advisor)
This diploma thesis is concerned with possibilities of patient data transfer from a pacemaker or implantable cardioverter-defibrillator to physician over GSM. Theoretical part describes options of data transfer in GSM networks, data appropriate for sending and a structure of message is proposed. A device, that is able to send medical data in a form of SMS messages is designed and constructed. The device uses a Freescale MC68HC908GP32 microcontroller, character display with a Hitachi HD44780 controller and a cell phone Sony CMD-J70. The program for microcontroller is written in assembler for HC08. For tabular view of received messages, an application software for PC was created.
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